Innovation is crucial to fulfil the potential of industrial biotechnology for sustainable production of fuels, chemicals, materials, food and feed. Similarly, scientific and technological advances in environmental biotechnology are needed to enable novel approaches to water purification, and ‘waste-to-product’ processes thus contributing to a circular economy. Increased fundamental knowledge encompassing enzymes, microorganisms and processes are essential for progress in this field. The Department of Biotechnology covers this research area and, based on new insights, selects, designs and tests new biobased catalysts, micro-organisms, and processes.
The department encompasses five research sections:
26 May 2017
Newly discovered ‘Siberian’ soda lake micro-organisms convert organic material directly into methaneResearchers from Delft and Moscow have discovered a new class of micro-organisms in Siberian soda lakes. These organisms grow in sodium carbonate brines with a pH 10 and convert methyl group of organic material into methane gas. On xxday May yyth they, together with colleagues from the US, UK, Germany and Spain, report on their findings in Nature Microbiology.
11 May 2017
Isabel Arends and Wiro Niessen elected as members of KNAWIsabel Arends, Professor of Biocatalysis and Organic Chemistry and Wiro Niessen, Professor of Biomedical Imaging are two of 26 new members appointed by the Royal Netherlands Academy of Arts and Sciences (KNAW).
07 April 2016
Two ERC Advanced Grants for TU Delft researchersTwo TU Delft researchers have been awarded an ERC Advanced Grant. Yuli Nazarov and Jack Pronk will both receive this European grant, which is only awarded to five-year projects conducted by internationally established research leaders. Higher-dimensional topological solids realized with multi-terminal superconducting junctions Prof. Yuli Nazarov of the Kavli Institute of Nanoscience (Applied Sciences) will receive an ERC Advanced Grant of €1.5 million for his research proposal on HITSUPERJU (Higher-dimensional topological solids realized with multi-terminal superconducting junctions). His project focuses on topological materials: materials that exhibit the properties of conductors and insulators simultaneously in certain states. Topological materials were only discovered relatively recently, and they have since become a hot topic in the world of solid-state physics. These exotic materials are fundamentally interesting and also hold promise for concrete applications (such as a quantum computer based on Majorana fermions). However, they are very difficult to prepare and control. Yet some properties of topological materials can be closely simulated using a multi-terminal superconducting junction. Nazarov will put together a team of theorists to investigate this and formulate concrete suggestions for experiments and applications. Eliminating Oxygen Requirements in Yeasts Prof. Jack Pronk of the Department of Biotechnology (Applied Sciences) will receive an ERC Advanced Grant of €2.5 million to conduct research on the oxygen requirements of yeasts and fungi. The project, entitled ELOXY (Eliminating Oxygen Requirements in Yeasts), aims to shed light on the as yet unanswered question of why many yeasts and fungi need molecular oxygen. Even when these micro- organisms can obtain plenty of energy from anaerobic fermentation processes, they still need small amounts of oxygen - and nobody knows why. This conundrum is not only of scientific interest, but is also relevant for large-scale application of yeasts and fungi in anaerobic industrial processes.
01 December 2020
Best Bioengineering MSc Graduate 2020: Nemo Andrea!“An outstandingly talented biophysicist who seamlessly combines deep biological knowledge with a strong ability for physical abstraction and numerical analysis.” This is how supervisors Marileen Dogterom and Arjen Jakobi (Applied Sciences, Bionanoscience) describe MSc Applied Physics graduate Nemo Andrea. With his thesis “Actin-Microtubule crosstalk studied by cryo electron microscopy” (graded 9.5), Nemo has won Delft Bioengineering Institute’s BEI MSc Graduate Award 2020, comprising of a €1000 personal cash prize. Runners up are MSc Nanobiology graduate Christos Gogou (second prize, €500) and MSc Life Science and Technology graduate Allison Wolder (third prize, €250). Cytoskeleton ‘Actin-microtubule crosstalk’ refers to the functional interactions that exist between these two cytoskeletal systems in living cells. An increasing number of molecular crosslinkers responsible for these interactions are being identified, but detailed mechanistic knowledge on how they connect cytoskeletal filaments is missing. Such knowledge is of great importance for efforts that aim to engineer artificial cells with active cytoskeletal networks from the bottom up. Cryo-EM Taking advantage of recent advances in cryo-electron microscopy, Nemo set out to visualize the architecture of microtubule-actin filament interactions in the presence of an engineered crosslinker. These high-resolution images give valuable insight into how these two filaments affect each other’s dynamic properties, something that was phenotypically observed before with fluorescence microscopy, but not understood at the structural level. In addition, Nemo explored new artificial intelligence methods to reduce the noise level of his cryo-EM images, and independently adapted the algorithm to improve its performance. While the data are too preliminary in terms of statistics to be immediately publishable, the results obtained are completely novel and important for future research in this field. Runners-up Excellent Master thesis work was done as well by runners-up Christos Gogou and Allison Wolder. A short description of their research can be found below. Overall, Delft Bioengineering Institute was impressed by the quality of the ten reports that were submitted, and had a very hard time making a selection. We want to thank all students for their outstanding efforts, and their supervisors for composing their nominations. We hope 2021 will see the start of a second five-year term for the institute, so we can continue to stimulate promising research in the field of bioengineering. BEI Best MSc Graduate Awards 2020 Nemo Andrea – “Actin-Microtubule crosstalk studied by cryo electron microscopy” Supervisors: Marileen Dogterom and Arjen Jakobi (Applied Sciences, Bionanoscience) Taking advantage of recent advances in cryo-electron microscopy, Nemo set out to visualize the architecture of microtubule-actin filament interactions in the presence of an engineered crosslinker. In addition, Nemo explored new artificial intelligence methods to reduce the noise level of his cryo-EM images, and independently adapted the algorithm to improve its performance. Christos Gogou – “Constructing a cryo-EM assay for molecular voltage-sensitivity of liposome-reconstituted membrane proteins” Supervisor: Dimphna Meijer (Applied Sciences, Bionanoscience) Christos bioengineered a novel assay to test if neuronal proteins are sensitive to voltage fluctuations. More specifically, he designed lipid-based vesicles that can be tuned to any membrane potential of choice. Neuronal membrane proteins can then be inserted in these vesicles and visualized at high resolution by cryo-electron microscopy. This assay mimics the action potential of neurons in vitro. Allison Wolder – “Scaling up ene reductase-catalysed selective asymmetric hydrogenation” Supervisor: Caroline Paul (Applied Sciences, Biotechnology) Allison worked on scaling up an incredible enzymatic reaction: hydrogenation. This is notoriously difficult to do, and it requires exploration of the mechanism of the enzyme and its stability. She carried out her thesis in the front seat, thinking outside of the box, suggesting new approaches, making new connections with external companies. The presentation and report were of excellent quality. If you would like to read a thesis, please send a message to N.vanBemmel@tudelft.nl and you will receive a copy.
11 November 2020
TU Delft and NRL host the “Workshop on Sustainable Aviation Fuels for Aircraft Propulsion”On October 15th, 2020 - the Delft University of Technology (TU Delft) in collaboration with the Netherlands Aerospace Center (NRL) hosted the “Workshop on Sustainable Aviation Fuels (SAF) for Aircraft Propulsion”. During the workshop, experts from the aviation and technology sectors, as well as representatives from NGO’s and research institutes gathered to share their vision and expectations about SAF production and availability for the aviation sector in the 2050-time horizon.
10 September 2020