Cancer causing mutations in the three dimensional genome

Themes: Life Science & Health

Basic research

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Our research uncovers which genes are affected by mutations in the DNA. For the first time, we are considering the DNA as a three dimensional structure, rather than a linear on. We can do this by exploiting so called chromatin conformation capture data. This will contribute to an improved understanding on how cancer is caused.


We are the Delft Bioinformatics Lab. We create algorithms that can find patterns in large volumes of molecular data. In this project we have created an algorithm that can integrate large collections of mutation data with 3D conformation data


Our research is basic research, and aims to better understand what goes wrong in the cell when mutations causes cancer. The knowledge gained from our algorithms is indispensable for the development of new cancer therapeutics. Unfortunately, this will be several years from now.

Dr. ir. Jeroen de Ridder


Prof. dr. ir. M.J.T. Reinders

Sepideh Babaei MSc