Student Projects
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Assessing patterns associated with cryptic splicing using Nanopore direct RNA datasets
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Viral genome analysis from wastewater sequencing data
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Benchmarking viral genome assembly tools
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Bacterial genome assembly in the presence of structural variation
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Can we detect immunotherapy side- effects from a blood test?
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Genome Graph Sequence Alignmentt and Mismatch Detection
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High-performance Interactive Tree Visualization
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Development of multiple whole genome species alignments to investigate the radiation of Bovidae
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Evolutionary insights into T cell receptor germline alleles
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Scoring clones of B cells in RNA-Seq data
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Comparison of pairwise long read aligners
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Mining the tumor microbiome for novel treatment strategies
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The sequencing quality atlas
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Evaluating the phylogenetic accuracy of Spoligotyping for M.Tuberculosis epidemiology
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Annotating genes in noisy reads through deep learning
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Automated validation M.Tuberculosis whole genome sequencing pipelines
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Linear mixed models for bacterial strain identification in metagenomic datasets
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High-throughput quality assessment of sequencing data
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De novo haplotype reconstruction of polyploid plants
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Pangenome read alignment and variant calling